Data
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METSIM adiponectin GWAS (Spracklen et al., 2020)
| Column Label CHR:POS A1/A2 NS MAF PVALUE BETA SEBETA | Description chromosome:position (hg19) Reference (A1) and alternate (A2) alleles Number of samples Minor allele frequency P-value Beta for trait for the alternate allele Standard error of the beta |
| Files for download: | |
| Description Filename Size Date | METSIM Adiponectin adjusted for BMI (GoT2D-Imputed) Adipon_adjBMI_GoT2D.txt.gz 249 MB 2020-09-02 |
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| Description Filename Size Date | METSIM Adiponectin adjusted for BMI (HRC-Imputed) Adipon_adjBMI_HRC.txt.gz 333 MB 2020-09-02 |
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| Description Filename Size Date | METSIM Adiponectin adjusted for fat mass % (GoT2D-Imputed) Adipon_adjFM_GoT2D.txt.gz 249 MB 2020-09-02 |
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METSIM adipose tissue cis-eQTL summary statistics (Raulerson et al., 2019)
| Column Label | Description |
| ENSG | Ensembl ID from GENCODE v19 |
| Gene | Gene name from GENCODE v19 |
| Variant | Chromosome:position_NonEffectAllele/EffectAllele |
| rsID | rsID of the variant, if none is available chr:pos |
| EAF | Effect allele frequency |
| pval | pvalue of association between variant and gene |
| beta | Effect size of association between variant and gene |
| SE | Standard error from linear regression |
| File for download: | |
| Description | METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs |
| Filename Size Date | METSIM_adipose_ciseQTLs_summaryStats_all.txt.gz 2.3GB 2020-02-07 |
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Adiponectin exome array meta-analysis (Spracklen et al., 2019)
| Column Label | Description |
| MarkerName | chromosome:position (hg19) |
| REF | Reference allele |
| ALT | Alternate allele |
| N | Total Sample Size |
| EAF | Effect (alternate) allele frequency |
| Nref | Number of samples homozygous for reference allele |
| Nhet | Number of samples heterozygous |
| Nalt | Number of samples homozygous for alternate allele |
| beta | Effect size (beta) for alternate allele |
| se | Standard error of the beta |
| stat | Statistic |
| direction | Effect direction for each included study |
| hsq | h-squared value |
| Pvalue | Pvalue for association between variant and trait |
| CochranQ.df | Degrees of freedom for Cochran Q test |
| CochranQ.Pval | Pvalue for Cochran Q test |
| CochranQ.stat | Statistic for Cochran Q test |
| I2 | Heterogeneity I^2 |
| File for download: | |
| File Size Date | Adiponectin Summary Statistics 544 2019-06-25 |
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China Health and Nutrition Survey glycemic trait results (Spracklen et al., 2017)
| Column label | Description |
| CHR:POS A1/A2 NS MAF Pvalue BETA SEBETA | Chromosome:position (hg19) Reference (A1) and alternate (A2) alleles Number of samples called Minor allele frequency P-value for trait Beta for trait for the alternative allele Standard error of the beta |
| Files for download: | |
| File Size Date | CHNS_fasting_glucose_results.txt 560mb 2017-10-24 |
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| File Size Date | CHNS_fasting_insulin_results.txt 557mb 2017-10-24 |
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| File Size Date | CHNS_HbA1c_results.txt 532mb 2017-10-24 |
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| File Size Date | CHNS_T2D_results.txt 583mb 2017-10-24 |