Data-old
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China Health and Nutrition Survey Data
Glycemic Traits Results (Spracklen et al. 2017)
The result files include the following columns:
Column Label Description
#CHR:POS chromosome:position (hg19)
A1/A2 Reference (A1) and alternate (A2) alleles
NS number of samples called
MAF minor allele frequency
PVALUE P-value for trait
BETA beta for trait for the alternative allele
SEBETA standard error of the beta
Files can be downloaded here:
Description CHNS Fasting Glucose results
Filename CHNS_fasting_glucose_results.txt
Size 560 MB
Date 2017-10-24
Description CHNS Fasting Insulin results
Filename CHNS_fasting_insulin_results.txt
Size 557 MB
Date 2017-10-24
Description CHNS Hba1c (Hemoglobin A1C) results
Filename CHNS_HbA1c_results.txt
Size 532 MB
Date 2017-10-24
Description CHNS T2D (Type 2 diabetes) results
Filename CHNS_T2D_results.txt
Size 583 MB
Date 2017-10-24
Adiponectin Exome Array Meta-analysis
Adiponectin Results (Spracklen et al. 2019)
The result files include the following columns:
Column Label Description
MarkerName chromosome:position (hg19)
REF Reference allele
ALT Alternate allele
N Total sample size
EAF Effect (alternate) allele frequency
Nref Number of samples homozygous for reference allele
Nhet Number of samples heterozygous
Nalt Number of samples homozygous for alternate allele
beta Effect size (beta) for alternate allele
se Standard error of the beta
stat Statistic
direction Effect direction for each included study
hsq h-squared value
Pvalue Pvalue for association between variant and trait
CochranQ.df Degrees of freedom for Cochran Q test
CochranQ.pVal Pvalue for Cochran Q test
CochranQ.stat Statistic for Cochran Q test
I2 Heterogeneity I^2
Files can be downloaded here:
File Size Date
Adiponectin Summary Statistics 544 MB 2019-o6-25
METSIM adipose tissue cis-eQTL summary statistics
Subcutaneous adipose tissue cis-eQTL Results (Raulerson CK, et al. 2019)
The results have the following columns:
Column Label Description
ENSG Ensembl ID from GENCODE v19
Gene gene name from GENCODE v19
Variant chromosome:position_NonEffectAllele/EffectAllele
rsID rsID of the variant, if none is available chr:pos
EAF effect allele frequency
pval pvalue of association between variant and gene
beta effect size of association between variant and gene
SE standard error from linear regression
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Files can be downloaded here:
Description METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Filename METSIM_adipose_ciseQTLs_summaryStats_all.txt.gz
Size 2.3 GB
Date 2020-02-07